Identification of methionine aminopeptidase 2 as a molecular target of the organoselenium drug ebselen and its derivatives/analogues: Synthesis, inhibitory activity and molecular modeling study

Bioorg Med Chem Lett. 2016 Nov 1;26(21):5254-5259. doi: 10.1016/j.bmcl.2016.09.050. Epub 2016 Sep 20.

Abstract

A collection of twenty-six organoselenium compounds, ebselen and its structural analogues, provided a novel approach for inhibiting the activity of human methionine aminopeptidase 2 (MetAP2). This metalloprotease, being responsible for the removal of the amino-terminal methionine from newly synthesized proteins, plays a key role in angiogenesis, which is essential for the progression of diseases, including solid tumor cancers. In this work, we discovered that ebselen, a synthetic organoselenium drug molecule with anti-inflammatory, anti-oxidant and cytoprotective activity, inhibits one of the main enzymes in the tumor progression pathway. Using three-step synthesis, we obtained twenty-five ebselen derivatives/analogues, ten of which are new, and tested their inhibitory activity toward three neutral aminopeptidases (MetAP2, alanine and leucine aminopeptidases). All of the tested compounds proved to be selective, slow-binding inhibitors of MetAP2. Similarly to ebselen, most of its analogues exhibited a moderate potency (IC50=1-12μM). Moreover, we identified three strong inhibitors that bind favorably to the enzyme with the half maximal inhibitory concentration in the submicromolar range.

Keywords: Angiogenesis; Binding mode; Metalloaminopeptidases; Organoselenium compounds; Structure–activity relationship.

MeSH terms

  • Aminopeptidases / antagonists & inhibitors*
  • Azoles / chemistry
  • Azoles / pharmacology*
  • Humans
  • Inhibitory Concentration 50
  • Isoindoles
  • Metalloendopeptidases / antagonists & inhibitors*
  • Models, Molecular
  • Organoselenium Compounds / chemistry
  • Organoselenium Compounds / pharmacology*
  • Protease Inhibitors / pharmacology*
  • Structure-Activity Relationship

Substances

  • Azoles
  • Isoindoles
  • Organoselenium Compounds
  • Protease Inhibitors
  • ebselen
  • Aminopeptidases
  • methionine aminopeptidase 2
  • Metalloendopeptidases